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accession-icon GSE113797
DUSP4 regulates input to the suprachiasmatic circadian network via VIP-induced activation of the ERK1/2 pathway
  • organism-icon Mus musculus
  • sample-icon 16 Downloadable Samples
  • Technology Badge IconIllumina MouseWG-6 v2.0 R2 expression beadchip

Description

Analysis of the genes and cellular signalling cascades mediating the response of SCN slices to vasoactive intestinal peptide (VIP). Primary goal was to find novel genes that may be involved in circadian phase shifting for further study. Promoter analysis of significantly regulated genes and gene ontology analysis would provide information into pathways VIP acts through in the SCN.

Publication Title

Vasoactive intestinal peptide controls the suprachiasmatic circadian clock network via ERK1/2 and DUSP4 signalling.

Sample Metadata Fields

Specimen part

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accession-icon GSE106260
Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells
  • organism-icon Homo sapiens
  • sample-icon 52 Downloadable Samples
  • Technology Badge IconIllumina HumanRef-8 v3.0 expression beadchip, Illumina HumanHT-12 V4.0 expression beadchip

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Specimen part, Cell line, Treatment

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accession-icon GSE829
Laminin binding/non-binding germ cells
  • organism-icon Mus musculus
  • sample-icon 21 Downloadable Samples
  • Technology Badge Icon Affymetrix Murine Genome U74A Version 2 Array (mgu74av2), Affymetrix Murine Genome U74A Array (mgu74a)

Description

Comparison of laminin binding and laminin non-binding germ cells

Publication Title

Defining the spermatogonial stem cell.

Sample Metadata Fields

No sample metadata fields

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accession-icon GSE830
Rat germ cells
  • organism-icon Rattus norvegicus
  • sample-icon 18 Downloadable Samples
  • Technology Badge Icon Affymetrix Rat Expression 230A Array (rae230a)

Description

Rat germ cells

Publication Title

Defining the spermatogonial stem cell.

Sample Metadata Fields

No sample metadata fields

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accession-icon GSE103374
Gene expression assessed by genome wide hybridization bead array in T84 polarized tight monolayers after challenge with celiac disease-associated bacteria and gluten [CTR glut bmix, bmix and gluten]
  • organism-icon Homo sapiens
  • sample-icon 12 Downloadable Samples
  • Technology Badge IconIllumina HumanHT-12 V4.0 expression beadchip

Description

Analysis of the influence of celiac disease-associated bacteria and gluten on intestinal epithelial cells

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Cell line, Treatment

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accession-icon GSE103100
Gene expression assessed by genome wide hybridization bead array in T84 polarized tight monolayers after challenge with celiac disease-associated bacteria and gluten [A grav, Bmix Bmix glut]
  • organism-icon Homo sapiens
  • sample-icon 12 Downloadable Samples
  • Technology Badge IconIllumina HumanHT-12 V4.0 expression beadchip

Description

Analysis of the influence of celiac disease-associated bacteria and gluten on intestinal epithelial cells

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Cell line, Treatment

View Samples
accession-icon GSE103107
Gene expression assessed by genome wide hybridization bead array in T84 polarized tight monolayers after challenge with celiac disease-associated bacteria [CTR 22 28 27]
  • organism-icon Homo sapiens
  • sample-icon 12 Downloadable Samples
  • Technology Badge IconIllumina HumanHT-12 V4.0 expression beadchip

Description

Analysis of the influence of celiac disease-associated bacteria on intestinal epithelial cells

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Cell line, Treatment

View Samples
accession-icon GSE102993
Gene expression assessed by genome wide hybridization bead array in intraepithelial lymphocytes (IELs) isolated from small intestinal biopsies of celiac disease patients with active disease and clinical controls
  • organism-icon Homo sapiens
  • sample-icon 8 Downloadable Samples
  • Technology Badge IconIllumina HumanRef-8 v3.0 expression beadchip

Description

Analysis of role of small intestinal intraepithelial lymphocytes (IELs) in the immunopathology of celiac disease

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Specimen part

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accession-icon GSE102991
Gene expression assessed by genome wide hybridization bead array in intestinal epithelial cells (IECs) isolated from small intestinal biopsies of celiac disease patients with active disease and clinical controls
  • organism-icon Homo sapiens
  • sample-icon 8 Downloadable Samples
  • Technology Badge IconIllumina HumanRef-8 v3.0 expression beadchip

Description

Analysis of role of small intestinal epithelial cells (IECs) in the immunopathology of celiac disease

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Specimen part

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accession-icon GSE41926
Gene expression analysis of Pseudomonas aeruginosa wild type, delta-gbdR, and delta-plcHR deletion mutants
  • organism-icon Pseudomonas aeruginosa pao1
  • sample-icon 6 Downloadable Samples
  • Technology Badge Icon Affymetrix Pseudomonas aeruginosa Array (paeg1a)

Description

Pseudomonas aeruginosa is a virulent opportunistic pathogen responsible for high morbity in COPD, burns , implanted medical devices and cystic fibrosis.

Publication Title

Anr and its activation by PlcH activity in Pseudomonas aeruginosa host colonization and virulence.

Sample Metadata Fields

No sample metadata fields

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