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SRP127325
Homo sapiens
10 Downloadable Samples
Illumina HiSeq 4000
Description
We report RNAseq data from subsequent passages of five organoid cultures. Overall design: RNA extracted from subsequent PDO passages was subjected to RNAseq.
Publication Title
Patient-derived organoids model treatment response of metastatic gastrointestinal cancers.
Sample Metadata Fields
Disease, Subject
View Samples- Homo sapiens
- 28 Downloadable Samples
- IlluminaHiSeq2000
Description
We reprogrammed human CD34+ cells from cord blood using a lentiviral vector encoding OCT4, SOX2 and KLF4.We collected RNA from parental CD34+ cells (3samples), reprogramming timepoints (9 timepoints), iPS clones derived from this experiment (6 clones), and human ES cell lines (9 samples). All samples were sequenced at 100bp reads. Overall design: Endogenous retroelement expression during reprogramming
Publication Title
Loss of transcriptional control over endogenous retroelements during reprogramming to pluripotency.
Sample Metadata Fields
No sample metadata fields
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