Genomic DNA hybridizations of Col-0, Tsu-1, and Kas-1 accessions of Arabidopsis thaliana

GSE20340

Arabidopsis thaliana

18 Downloadable Samples

Affymetrix Arabidopsis ATH1 Genome Array (ath1121501)

Submitter Supplied Information

Description

These data provide a basis for the detection of sequence based polymorphisms between the Col-1, Tsu-1, and Kas-1 accessions of Arabidopsis thaliana. The experimental data provides an initial characterization of differences among the accessions, as well as a means for improving gene expression studies with the filtering of SFP from arrays studies.

PubMed ID

20302603

Publication Title

Exploring genetic and expression differences between physiologically extreme ecotypes: comparative genomic hybridization and gene expression studies of Kas-1 and Tsu-1 accessions of Arabidopsis thaliana.

Total Samples

Submitter’s Institution

University of Texas at Austin

Authors

Juenger TE, Sen S, Bray E, Stahl E, Wayne T, McKay J, Richards JH

Source Repository

Gene Expression Omnibus (GEO)

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